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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52253508_52254291_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52253508 - 52254291

Intron Length:

784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCCCC

5'SS Class:

major

3'SS Sequence:

TTGCTCCTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TTGCTCCTAACA

Flanking Amino Acid:

TAGQPSVPKKPSSQPGSPAA

Intron Amino Acid Position:

970

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.3

51.8

45.5

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

74.7

0.56

0.9

70.1

35.2

Minor 5ss

43.6

-0.7

3.1

60.9

43.6

Minor BPS

61.6

0.36

1.7

73.32

38.2

Associated Gene:

Gene:

MRTFA

Ensembl Gene ID:

ENSAPLG00000014434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048237

52211943 - 52256614

44672

ENSAPLT00000021713

52173078 - 52255614

82537

ENSAPLT00000021623

52173078 - 52256614

83537