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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52260816_52260906_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52260816 - 52260906

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCGAC

U12 Branch Point Sequence:

GTGTGCCGACTG

Flanking Amino Acid:

ACHPWLFIEEAASREVERDF

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

76.8

33.7

Major BPS

47.5

-0.1

1.3

43.8

40.8

Major PPT

70.2

0.46

0.8

62.1

34.7

Minor 5ss

28.2

-2.5

3.1

38.3

46.6

Minor BPS

36.9

-1.1

2.2

41.37

43.3

Associated Gene:

Gene:

SGSM3

Ensembl Gene ID:

ENSAPLG00000014613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015268

52258834 - 52270932

12099