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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52268523_52268840_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52268523 - 52268840

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

GGCTGTCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACCAT

U12 Branch Point Sequence:

GCCAGCTGACCA

Flanking Amino Acid:

SNDETIAAKQIEKDLLRTMP

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

50.4

0.01

1.4

60.8

45.4

Major PPT

63.1

0.29

1.1

57.5

43.2

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

40.6

-0.7

45.24

43.6

Associated Gene:

Gene:

SGSM3

Ensembl Gene ID:

ENSAPLG00000014613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015268

52258834 - 52270932

12099