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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52269285_52270013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52269285 - 52270013

Intron Length:

729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCCA

5'SS Class:

major

3'SS Sequence:

CCCTTGCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCTCACCCATCT

Flanking Amino Acid:

DEFGFRVDKEDGAETNSSKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

65.6

Major BPS

72.4

0.56

73.5

32.5

Major PPT

73.1

0.52

0.8

64.2

36.7

Minor 5ss

30.4

-2.2

3.3

39.6

45.9

Minor BPS

39.2

-0.7

2.1

55.52

45.8

Associated Gene:

Gene:

SGSM3

Ensembl Gene ID:

ENSAPLG00000014613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015268

52258834 - 52270932

12099