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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52312534_52313410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52312534 - 52313410

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGCAAA

5'SS Class:

major

3'SS Sequence:

CCTGTCTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

CTTTGTCTAATT

Flanking Amino Acid:

EAAKAQTALHMCVLGNTTIL

Intron Amino Acid Position:

1650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

72.3

34.3

Major BPS

76.9

0.67

66.3

40.4

Major PPT

77.2

0.61

0.8

37.1

Minor 5ss

35.7

-1.6

44.1

43.8

Minor BPS

52.2

0.15

2.1

75.83

41.7

Associated Gene:

Gene:

TNRC6B

Ensembl Gene ID:

ENSAPLG00000009347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026826

52312143 - 52427045

114903

ENSAPLT00000023148

52312143 - 52427011

114869

ENSAPLT00000036322

52312143 - 52427011

114869

ENSAPLT00000017762

52312143 - 52387729

75587

ENSAPLT00000032152

52312143 - 52427045

114903

ENSAPLT00000009791

52312143 - 52427045

114903

ENSAPLT00000030062

52312143 - 52387729

75587