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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52316091_52318559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52316091 - 52318559

Intron Length:

2469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCGGG

5'SS Class:

major

3'SS Sequence:

TTTAATCTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATC

Flanking Amino Acid:

NSFTNVHSTSAKFSDYKSTW

Intron Amino Acid Position:

1505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

59.7

45.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.8

0.65

0.9

70.5

40.7

Minor 5ss

41.8

-0.9

3.2

55.4

48.8

Minor BPS

0.7

1.1

78.22

31.1

Associated Gene:

Gene:

TNRC6B

Ensembl Gene ID:

ENSAPLG00000009347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023148

52312143 - 52427011

114869

ENSAPLT00000017762

52312143 - 52387729

75587

ENSAPLT00000036322

52312143 - 52427011

114869

ENSAPLT00000009791

52312143 - 52427045

114903

ENSAPLT00000030062

52312143 - 52387729

75587

ENSAPLT00000026826

52312143 - 52427045

114903