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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52318656_52318850_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52318656 - 52318850

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCTAC

U12 Branch Point Sequence:

CTCCCTTTGATA

Flanking Amino Acid:

DHQLLRDNTTGSNSSLNTSL

Intron Amino Acid Position:

1473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

40.5

-0.6

1.3

29.9

35.6

Major PPT

70.3

0.46

0.9

67.6

32.4

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

59.4

0.29

1.3

62.91

38.1

Associated Gene:

Gene:

TNRC6B

Ensembl Gene ID:

ENSAPLG00000009347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023148

52312143 - 52427011

114869

ENSAPLT00000017762

52312143 - 52387729

75587

ENSAPLT00000036322

52312143 - 52427011

114869

ENSAPLT00000009791

52312143 - 52427045

114903

ENSAPLT00000030062

52312143 - 52387729

75587

ENSAPLT00000026826

52312143 - 52427045

114903