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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52321210_52321410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52321210 - 52321410

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAGGG

5'SS Class:

major

3'SS Sequence:

TTTAATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTCTTTTTAATA

Flanking Amino Acid:

ASQDANMHKNGAIVPPGKAR

Intron Amino Acid Position:

1365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

58.6

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.7

0.71

0.9

78.4

39.4

Minor 5ss

24.5

-2.9

3.1

26.1

Minor BPS

68.4

0.57

1.2

69.67

37.9

Associated Gene:

Gene:

TNRC6B

Ensembl Gene ID:

ENSAPLG00000009347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026826

52312143 - 52427045

114903

ENSAPLT00000023148

52312143 - 52427011

114869

ENSAPLT00000036322

52312143 - 52427011

114869

ENSAPLT00000017762

52312143 - 52387729

75587

ENSAPLT00000032152

52312143 - 52427045

114903

ENSAPLT00000009791

52312143 - 52427045

114903

ENSAPLT00000030062

52312143 - 52387729

75587