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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52321546_52321839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52321546 - 52321839

Intron Length:

294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

GTTTGTTTCACA

Flanking Amino Acid:

TKGQIPGYGSGFGSSGMDYG

Intron Amino Acid Position:

1320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

81.6

0.71

0.9

75.8

38.1

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

53.6

0.1

2.2

71.5

41.1

Associated Gene:

Gene:

TNRC6B

Ensembl Gene ID:

ENSAPLG00000009347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023148

52312143 - 52427011

114869

ENSAPLT00000036322

52312143 - 52427011

114869

ENSAPLT00000017762

52312143 - 52387729

75587

ENSAPLT00000032152

52312143 - 52427045

114903

ENSAPLT00000009791

52312143 - 52427045

114903

ENSAPLT00000030062

52312143 - 52387729

75587

ENSAPLT00000026826

52312143 - 52427045

114903