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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52322241_52322789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52322241 - 52322789

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

ACTTCTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTCCCCCCCACT

Flanking Amino Acid:

QLPQIPQFQLACQLLLQQQQ

Intron Amino Acid Position:

1230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

71.7

38.4

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

79.1

0.66

0.8

73.9

30.4

Minor 5ss

37.9

-1.4

2.7

47.5

Minor BPS

-0.2

2.3

70.64

45.7

Associated Gene:

Gene:

TNRC6B

Ensembl Gene ID:

ENSAPLG00000009347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023148

52312143 - 52427011

114869

ENSAPLT00000036322

52312143 - 52427011

114869

ENSAPLT00000017762

52312143 - 52387729

75587

ENSAPLT00000032152

52312143 - 52427045

114903

ENSAPLT00000009791

52312143 - 52427045

114903

ENSAPLT00000030062

52312143 - 52387729

75587

ENSAPLT00000026826

52312143 - 52427045

114903