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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52351167_52359010_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52351167 - 52359010

Intron Length:

7844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTACTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTGCTCTTACTT

Flanking Amino Acid:

DKKKKESAQKVTDQKTKVPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

86.3

0.82

0.8

80.7

30.9

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

61.1

0.43

1.6

76.51

40.7

Associated Gene:

Gene:

TNRC6B

Ensembl Gene ID:

ENSAPLG00000009347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026826

52312143 - 52427045

114903

ENSAPLT00000023148

52312143 - 52427011

114869

ENSAPLT00000036322

52312143 - 52427011

114869

ENSAPLT00000017762

52312143 - 52387729

75587

ENSAPLT00000032152

52312143 - 52427045

114903

ENSAPLT00000009791

52312143 - 52427045

114903

ENSAPLT00000030062

52312143 - 52387729

75587