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Intron Name: Anas_platyrhynchos_platyrhynchos_1_524268_528200_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

524268 - 528200

Intron Length:

3933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAAGGTT

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTGAACCACATT

Flanking Amino Acid:

ASSHFSGRARVFIKEIEHAM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.2

63.2

41.3

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

84.8

0.78

0.9

76.9

42.1

Minor 5ss

36.5

-1.5

3.9

55.6

48.7

Minor BPS

37.8

-0.8

2.3

58.04

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030366

524146 - 629157

105012