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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52498598_52498968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52498598 - 52498968

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

GTCTCCTTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

GATTCCTTGTTC

Flanking Amino Acid:

HTDPLHQQTPRTLWVRALYD

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.5

34.3

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

77.2

0.61

0.8

68.8

37.1

Minor 5ss

36.5

-1.5

3.4

54.7

43.6

Minor BPS

-0.3

3.4

67.19

38.7

Associated Gene:

Gene:

GRAP2

Ensembl Gene ID:

ENSAPLG00000009697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033424

52498418 - 52535824

37407

ENSAPLT00000026731

52498418 - 52539478

41061

ENSAPLT00000010106

52498418 - 52514971

16554