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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52503067_52504222_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

52503067 - 52504222

Intron Length:

1156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTGCT

5'SS Class:

major

3'SS Sequence:

CAACTGGATTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ACTTTTTCAACT

Flanking Amino Acid:

NSHGDFSISVRHEDDVQHFK

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.2

71.5

38.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

59.1

0.21

1.1

54.4

44.5

Minor 5ss

-0.3

2.9

68.1

42.9

Minor BPS

64.7

0.54

1.5

77.81

Associated Gene:

Gene:

GRAP2

Ensembl Gene ID:

ENSAPLG00000009697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033424

52498418 - 52535824

37407

ENSAPLT00000026731

52498418 - 52539478

41061

ENSAPLT00000010106

52498418 - 52514971

16554