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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52509963_52535552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

52509963 - 52535552

Intron Length:

25590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGATC

5'SS Class:

major

3'SS Sequence:

ATACTTCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

AAGCATATACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

70.4

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

79.1

0.65

0.9

70.2

40.5

Minor 5ss

35.1

-1.7

3.5

51.2

45.6

Minor BPS

39.8

-0.7

1.8

50.82

Associated Gene:

Gene:

GRAP2

Ensembl Gene ID:

ENSAPLG00000009697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033424

52498418 - 52535824

37407