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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52610649_52611394_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52610649 - 52611394

Intron Length:

746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

GGTGCTTTGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TCTTCCCCATTT

Flanking Amino Acid:

QSWLKHEGTKVPPSPYSPGT

Intron Amino Acid Position:

1796

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

76.3

0.65

67.3

39.3

Major PPT

67.4

0.39

1.1

65.4

45.5

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

48.4

-0

2.1

72.84

44.3

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124