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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52611561_52611920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52611561 - 52611920

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCCCC

5'SS Class:

major

3'SS Sequence:

TGTTTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTGTCTTCACT

Flanking Amino Acid:

TSQLSPKETKDGKDSPDSTG

Intron Amino Acid Position:

1741

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

61.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

78.5

0.64

0.9

74.4

35.3

Minor 5ss

35.5

-1.6

2.8

43.9

43.4

Minor BPS

67.2

0.62

1.9

86.99

39.2

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010411

52608318 - 52689441

81124

ENSAPLT00000040614

52608318 - 52689441

81124