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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52617422_52618174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52617422 - 52618174

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGG

5'SS Class:

major

3'SS Sequence:

ACTTCCCCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAT

U12 Branch Point Sequence:

CCTTCCATCATT

Flanking Amino Acid:

TGDNWNGIMKDTLRDCSHDD

Intron Amino Acid Position:

1538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.1

67.1

44.6

Major BPS

63.3

0.33

1.2

65.6

39.7

Major PPT

65.2

0.34

61.4

34.7

Minor 5ss

37.6

-1.4

3.2

49.7

46.6

Minor BPS

51.8

0.14

2.1

72.18

45.2

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124