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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52618953_52622613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52618953 - 52622613

Intron Length:

3661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAC

5'SS Class:

strong_major

3'SS Sequence:

GGTTTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

ATAGGCTGACCA

Flanking Amino Acid:

LDTVVQALPQVGNLGLLFML

Intron Amino Acid Position:

1471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.4

36.7

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

77.9

0.63

73.5

41.8

Minor 5ss

31.6

-2.1

3.2

41.7

Minor BPS

43.4

-0.5

2.1

55.29

43.4

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010411

52608318 - 52689441

81124

ENSAPLT00000040614

52608318 - 52689441

81124