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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52623471_52624048_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52623471 - 52624048

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TCTTCCCTAACT

Flanking Amino Acid:

AFGLRRFFKDRWNQLDLAIV

Intron Amino Acid Position:

1402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

82.2

0.73

0.9

87.5

23.3

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

78.1

0.97

1.6

92.91

35.6

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124