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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52624159_52625834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52624159 - 52625834

Intron Length:

1676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

CTTGCCTCAATT

Flanking Amino Acid:

MSLEHYNQPVSLETALKYCN

Intron Amino Acid Position:

1366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

73.6

0.53

69.9

36.6

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

64.9

0.55

1.7

79.83

42.7

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124