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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52625987_52627046_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52625987 - 52627046

Intron Length:

1060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGGCAC

5'SS Class:

major

3'SS Sequence:

CTTTCCACTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TTCCTGCTAACT

Flanking Amino Acid:

RLRRLEKKRRKAQRLPYYAT

Intron Amino Acid Position:

1315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

57.7

41.7

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

69.1

0.43

69.2

30.2

Minor 5ss

32.3

-2

3.3

38.4

40.8

Minor BPS

47.9

-0

2.3

73.51

43.3

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124