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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52628904_52629967_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52628904 - 52629967

Intron Length:

1064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

TCCTCTCTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

TCCTCTCTCACA

Flanking Amino Acid:

FIIFGILGVQLFKGKFYHCL

Intron Amino Acid Position:

1179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

60.3

0.26

65.5

Major PPT

80.6

0.69

0.7

75.3

26.9

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

48.8

-0.1

2.1

63.12

43.7

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124