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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52630095_52630432_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52630095 - 52630432

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTCAGAGCC

5'SS Class:

major

3'SS Sequence:

CCTTCCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

CCCTCTGTCACC

Flanking Amino Acid:

LRLLRTLRPLRVISRAPGLK

Intron Amino Acid Position:

1136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.3

59.6

40.7

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

0.72

0.7

31.9

Minor 5ss

27.6

-2.6

3.1

35.9

40.3

Minor BPS

44.1

-0.4

2.3

52.59

45.8

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010411

52608318 - 52689441

81124

ENSAPLT00000040614

52608318 - 52689441

81124