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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52630618_52631628_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52630618 - 52631628

Intron Length:

1011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAC

U12 Branch Point Sequence:

AGCCATTTACCC

Flanking Amino Acid:

AIFVAEMTLKVVSLGLYFGD

Intron Amino Acid Position:

1075

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

66.4

0.41

37.6

Major PPT

81.6

0.71

0.7

75.8

26.2

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

45.9

-0.3

1.7

51.76

39.1

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124