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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52631698_52632675_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52631698 - 52632675

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTCTTTTATT

Flanking Amino Acid:

ERPQIEHRSTERIFLTVSNY

Intron Amino Acid Position:

1052

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

66.2

39.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

81.2

0.7

0.9

73.5

41.9

Minor 5ss

35.7

-1.6

2.9

45.4

42.5

Minor BPS

75.6

0.89

1.5

91.64

31.3

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124