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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52632800_52633841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52632800 - 52633841

Intron Length:

1042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGCA

5'SS Class:

major

3'SS Sequence:

AACTTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAGCAC

U12 Branch Point Sequence:

CCTACTGGAACT

Flanking Amino Acid:

WSIYLFSPQNRFRLLCQTII

Intron Amino Acid Position:

1010

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

68.9

35.7

Major BPS

44.8

-0.3

1.2

49.5

35.1

Major PPT

79.9

0.67

0.9

73.7

35.9

Minor 5ss

35.4

-1.7

2.9

42.3

44.4

Minor BPS

46.3

-0.2

2.1

64.88

45.7

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124