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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52633943_52634758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52633943 - 52634758

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGCATCTCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAC

U12 Branch Point Sequence:

TAACCAGTGACA

Flanking Amino Acid:

RGEDDEEIDYSLCFRIRKMM

Intron Amino Acid Position:

977

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

82.6

29.4

Major BPS

65.7

0.39

1.1

67.4

36.7

Major PPT

75.3

0.57

0.9

65.8

40.8

Minor 5ss

35.4

-1.7

2.9

48.5

40.3

Minor BPS

45.2

-0.3

2.2

59.13

39.9

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010411

52608318 - 52689441

81124

ENSAPLT00000040614

52608318 - 52689441

81124