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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52635176_52636330_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52635176 - 52636330

Intron Length:

1155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTGAAT

U12 Branch Point Sequence:

GATGGCTGAATC

Flanking Amino Acid:

GRMTYDQRSLSSSRSSHYGA

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

47.7

-0.1

1.6

57.6

45.8

Major PPT

82.3

0.73

0.8

32.6

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

47.3

-0.2

1.9

57.12

41.5

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124