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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52638535_52638969_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52638535 - 52638969

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

GCTTCTTCATTT

Flanking Amino Acid:

AILVEGFQAEGDANRSYSEE

Intron Amino Acid Position:

740

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

0.63

69.2

46.1

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

50.7

0.1

1.8

68.46

43.1

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124