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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52639763_52640266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52639763 - 52640266

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGCCGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTAGCACTAATT

Flanking Amino Acid:

MLLMLFIFIFSILGMHIFGC

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

62.9

0.29

56.9

38.9

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

50.6

0.1

74.93

41.7

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010411

52608318 - 52689441

81124

ENSAPLT00000040614

52608318 - 52689441

81124