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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52640453_52641084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52640453 - 52641084

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACAAGG

5'SS Class:

major

3'SS Sequence:

CTCTGGGCCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGTCCCTTGCGC

Flanking Amino Acid:

NIFDSIIVIISIWEIIGQSD

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

62.5

43.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

60.1

0.23

0.9

53.5

36.7

Minor 5ss

-1.9

2.9

40.4

45.3

Minor BPS

41.4

-0.6

3.6

64.09

41.7

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010411

52608318 - 52689441

81124

ENSAPLT00000040614

52608318 - 52689441

81124