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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52648956_52650382_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52648956 - 52650382

Intron Length:

1427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGGATT

5'SS Class:

major

3'SS Sequence:

TTTCTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TCTCTTTTAAGC

Flanking Amino Acid:

GMHRKSQRHYRLCQQHNSLD

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

76.6

38.6

Major BPS

75.6

0.64

1.5

34.5

Major PPT

84.4

0.77

0.7

77.3

31.4

Minor 5ss

40.4

-1.1

3.4

63.3

Minor BPS

58.6

0.25

1.6

66.58

39.6

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124