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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52655440_52656097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52655440 - 52656097

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TCTCTCCTGATT

Flanking Amino Acid:

IGYAWIVIFQVITLEGWVEI

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

78.8

0.71

67.6

40.6

Major PPT

86.9

0.83

0.7

84.4

30.5

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

53.6

0.19

1.6

72.66

38.6

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124