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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52658561_52672159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52658561 - 52672159

Intron Length:

13599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTCAT

5'SS Class:

major

3'SS Sequence:

TATCCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

GTTCTCTTATCC

Flanking Amino Acid:

RPLKAINRVPSMRILVNLLL

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

39.5

Major BPS

79.1

0.72

69.3

38.4

Major PPT

0.58

0.8

69.7

30.5

Minor 5ss

38.1

-1.3

3.1

55.9

42.3

Minor BPS

63.2

0.39

1.6

72.41

38.4

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010411

52608318 - 52689441

81124

ENSAPLT00000040614

52608318 - 52689441

81124