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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52672258_52688431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52672258 - 52688431

Intron Length:

16174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTTGA

5'SS Class:

major

3'SS Sequence:

TCTTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGTTTTAAACT

Flanking Amino Acid:

NRLDFFIVMAGMVEYSLDLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

65.9

42.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.88

0.6

84.5

23.3

Minor 5ss

37.7

-1.4

3.1

40.4

45.8

Minor BPS

66.8

0.61

1.6

82.67

39.4

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124