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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52688566_52689348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52688566 - 52689348

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGATTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GCTTGTTAAACT

Flanking Amino Acid:

CLSDRCKILQVFDDFIFIFF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

73.1

0.52

69.4

40.8

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

51.4

0.12

2.1

71.8

45.5

Associated Gene:

Gene:

CACNA1I

Ensembl Gene ID:

ENSAPLG00000009947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040614

52608318 - 52689441

81124

ENSAPLT00000010411

52608318 - 52689441

81124