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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52823847_52823980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52823847 - 52823980

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTGGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GGTTGCTGATGT

Flanking Amino Acid:

IKGRVVKSAIEEYHKKKAVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

65.2

0.34

57.6

43.2

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

42.9

-0.4

2.3

62.38

Associated Gene:

Gene:

RPS19BP1

Ensembl Gene ID:

ENSAPLG00000015585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016236

52823356 - 52825176

1821