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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52824079_52825041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52824079 - 52825041

Intron Length:

963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCGTTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAC

U12 Branch Point Sequence:

CTAACAACAACT

Flanking Amino Acid:

CVADKAVTQQILTQNRGRKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

59.1

0.23

1.2

61.6

34.1

Major PPT

74.3

0.55

33.6

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

44.6

-0.3

2.1

64.74

44.6

Associated Gene:

Gene:

RPS19BP1

Ensembl Gene ID:

ENSAPLG00000015585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016236

52823356 - 52825176

1821