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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52844384_52850539_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

52844384 - 52850539

Intron Length:

6156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTTGCTG

5'SS Class:

weak_major

3'SS Sequence:

GATTTATCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

ACAGCCTCAACA

Flanking Amino Acid:

TLYSSLSEPEMSFRASPALP

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.4

49.8

46.2

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

72.3

0.5

0.9

42.9

Minor 5ss

35.9

-1.6

3.3

47.8

47.7

Minor BPS

56.8

0.21

1.7

62.96

43.1

Associated Gene:

Gene:

MIEF1

Ensembl Gene ID:

ENSAPLG00000015534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016187

52844153 - 52854924

10772