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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52851329_52852376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52851329 - 52852376

Intron Length:

1048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTGTTCTTACCG

Flanking Amino Acid:

LSGSLYDDLQVVTADHIQLI

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

77.3

37.6

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

66.8

0.38

1.2

70.2

39.4

Minor 5ss

36.9

-1.5

2.9

51.8

44.6

Minor BPS

65.8

0.36

1.7

70.44

43.2

Associated Gene:

Gene:

MIEF1

Ensembl Gene ID:

ENSAPLG00000015534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036158

52849522 - 52879662

30141

ENSAPLT00000016187

52844153 - 52854924

10772