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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52852640_52854480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52852640 - 52854480

Intron Length:

1841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAACAAT

U12 Branch Point Sequence:

GGTGAAACAATC

Flanking Amino Acid:

LPTDHSAADADFFRPAKPKP

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

49.4

-0

1.3

57.1

35.8

Major PPT

83.1

0.75

0.8

31.7

Minor 5ss

38.7

-1.3

3.1

51.6

45.2

Minor BPS

36.4

-1

1.9

43.85

36.8

Associated Gene:

Gene:

MIEF1

Ensembl Gene ID:

ENSAPLG00000015534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036158

52849522 - 52879662

30141

ENSAPLT00000016187

52844153 - 52854924

10772