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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52854662_52854775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52854662 - 52854775

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GGTGTTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGAAAT

U12 Branch Point Sequence:

AGCGGCTGAAAT

Flanking Amino Acid:

LGIATLAVKRMYDRAISAPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

72.2

39.5

Major BPS

54.8

0.12

1.3

62.7

40.5

Major PPT

73.5

0.53

69.2

46.1

Minor 5ss

30.4

-2.2

3.2

31.9

42.5

Minor BPS

43.9

-0.3

57.22

44.9

Associated Gene:

Gene:

MIEF1

Ensembl Gene ID:

ENSAPLG00000015534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036158

52849522 - 52879662

30141

ENSAPLT00000016187

52844153 - 52854924

10772