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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52908881_52909379_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52908881 - 52909379

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ACTCCCGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

GGTGCCTCATCT

Flanking Amino Acid:

LNNKLYIANVGTNRALLCKS

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

34.9

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

69.8

0.45

0.9

Minor 5ss

36.6

-1.5

2.9

46.4

44.2

Minor BPS

49.9

0.07

70.05

46.2

Associated Gene:

Gene:

TAB1

Ensembl Gene ID:

ENSAPLG00000015131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033403

52903663 - 52911755

8093

ENSAPLT00000015802

52904574 - 52911755

7182