Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_52910097_52910728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52910097 - 52910728

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

TGGCCTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTTCTCTTATGG

Flanking Amino Acid:

DADVRRVLLQAFDVVERSFL

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

79.1

0.72

69.3

38.4

Major PPT

79.6

0.67

0.9

76.7

37.4

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

-0

64.15

43.9

Associated Gene:

Gene:

TAB1

Ensembl Gene ID:

ENSAPLG00000015131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015802

52904574 - 52911755

7182

ENSAPLT00000033403

52903663 - 52911755

8093