Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_52911191_52911635_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52911191 - 52911635

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

TCCTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

CGGGGTCTAATT

Flanking Amino Acid:

AAQRRSLLQSEQQPSWTDDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

59.6

39.9

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

0.47

0.8

61.6

Minor 5ss

29.6

-2.3

3.2

35.3

41.4

Minor BPS

41.3

-0.5

52.18

43.5

Associated Gene:

Gene:

TAB1

Ensembl Gene ID:

ENSAPLG00000015131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033403

52903663 - 52911755

8093

ENSAPLT00000015802

52904574 - 52911755

7182