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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52922676_52923259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52922676 - 52923259

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCTTC

5'SS Class:

major

3'SS Sequence:

TGGCCCATCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCCAT

U12 Branch Point Sequence:

GGTGGCCCATCC

Flanking Amino Acid:

KAVLSDIGVSAFWAFLWFVG

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

69.2

38.5

Major BPS

45.8

-0.2

1.5

52.1

45.2

Major PPT

64.9

0.34

54.9

40.1

Minor 5ss

42.5

-0.8

50.6

46.1

Minor BPS

35.6

-1.1

2.2

44.93

42.8

Associated Gene:

Gene:

SYNGR1

Ensembl Gene ID:

ENSAPLG00000028832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020884

52919946 - 52929895

9950