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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52935195_52936047_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52935195 - 52936047

Intron Length:

853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGCCAA

U12 Branch Point Sequence:

TTAGCCAAACCT

Flanking Amino Acid:

DECKRRFYKNWHKSKKKAFT

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

0.9

67.8

37.5

Major BPS

48.1

-0.1

1.3

56.4

40.6

Major PPT

68.3

0.41

68.2

32.4

Minor 5ss

29.9

-2.3

3.3

35.1

42.4

Minor BPS

45.3

-0.2

2.2

69.44

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042275

52933475 - 52938816

5342

ENSAPLT00000023065

52933399 - 52939346

5948

ENSAPLT00000021816

52933475 - 52938816

5342

ENSAPLT00000015254

52932531 - 52939346

6816