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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52937782_52938263_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52937782 - 52938263

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

CACGCACTGACT

Flanking Amino Acid:

DLSDKSINPLGGFVHYGEVT

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

77.8

0.63

0.9

76.8

31.8

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

43.8

-0.4

57.81

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042275

52933475 - 52938816

5342

ENSAPLT00000023065

52933399 - 52939346

5948

ENSAPLT00000015254

52932531 - 52939346

6816