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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52937782_52938633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52937782 - 52938633

Intron Length:

852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTCTCGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTGTGCTCACCT

Flanking Amino Acid:

DLSDKSINPLSLLVQTKRRA

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

74.4

0.55

0.8

69.8

30.2

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

46.8

-0.1

2.2

67.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021816

52933475 - 52938816

5342